viral_seq 1.10.3

A Ruby Gem with bioinformatics tools for processing viral NGS data. Specifically for Primer-ID sequencing and HIV drug resistance analysis.

Gemfile:
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install:
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Versions:

1.10.3 December 11, 2025 (3.6 MB)
1.10.2 July 21, 2025 (3.6 MB)
1.10.0 May 02, 2025 (3.6 MB)
1.9.1 December 02, 2024 (3.6 MB)
1.9.0 November 14, 2024 (3.6 MB)

Show all versions (54 total)

Runtime Dependencies (7):

colorize ~> 0.1

combine_pdf ~> 1.0, >= 1.0.0

muscle_bio = 0.4

prawn ~> 2.3, >= 2.3.0

prawn-table ~> 0.2, >= 0.2.0

shellwords ~> 0.2

virust-locator-ruby ~> 0.3

Development Dependencies (3):

bundler ~> 2.5

rake ~> 13.0

rspec ~> 3.0

Show all transitive dependencies

Requirements:

R required for some functions

Owners:

Pushed by:

Authors:

Shuntai Zhou, Michael Clark

SHA 256 checksum:

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Total downloads 66,866

For this version 137

Version Released:
December 11, 2025 6:58pm

License:
MIT

Required Ruby Version: >= 2.5

Required Rubygems Version: >= 1.3.6

Links:

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