bio 的反向依赖 以下 Gem 的最新版本需要 bio
rbbt-sources 3.4.2
Data sources like PubMed, Entrez Gene, or Gene Ontology
246,999 下载
mspire 0.10.8.0
mass spectrometry proteomics, lipidomics, and tools, a rewrite of mspire, merging of ms...
235,553 下载
snp-search 2.12.0
Use the snp-search tool to create, import, manipulate and query your SNP database
134,128 下载
bio-samtools 2.6.2
Binder of samtools for ruby, on the top of FFI. This project was born from the need...
128,821 下载
bio-polyploid-tools 1.2.1
Repository of tools developed at Crop Genetics in JIC to work with polyploid wheat
125,199 下载
bacterial-annotator 1.0.1
GEM to annotate bacterial genome sequence based on a reference genome and complete the ...
110,818 下载
protk 1.4.4
Commandline tools for proteomics
102,792 下载
parse_fasta 2.5.2
Provides nice, programmatic access to fasta and fastq files, as well as providing Seque...
91,107 下载
bio-gadget 0.5.0
Gadgets for bioinformatics
86,944 下载
iroki 0.0.36
Command line app and library code for Iroki, a phylogenetic tree customization program.
84,382 下载
transrate 1.0.1
a library and command-line tool for quality assessment of de-novo transcriptome assemblies
82,558 下载
bio-ucsc-api 0.6.5
Ruby UCSC API: accessing the UCSC Genome Database using Ruby
79,402 下载
bio-svgenes 0.4.1
This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...
63,684 下载
ms-core 0.0.19
basic, shared functionality for mspire libraries.
58,760 下载
biointerchange 1.0.8
BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous ...
50,225 下载
crb-blast 0.6.9
See summary
50,094 下载
wrnap 1.2.2
A comprehensive wrapper w(RNA)pper for various RNA CLI programs.
48,439 下载
bio-gff3 0.9.1
GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...
47,442 下载
full_lengther_next 1.0.6
FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and i...
44,835 下载
bio-basespace-sdk 0.1.7
BaseSpace Ruby SDK is a Ruby based Software Development Kit to be used in the developme...
43,699 下载
bio-band 0.1.11
Data mining and machine learning algorithms for JRuby
40,923 下载
genevalidatorapp 2.1.8
A Web App wrapper for GeneValidator, a program for validating gene predictions.
40,718 下载
rbfam 12.0.1.1
Light wrapper for RFam data in Ruby.
40,313 下载
genevalidator 2.1.5
The tool validates the input predicted genes and provides useful information (length va...
39,803 下载
fasta_util 0.5.2
Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on th...
38,917 下载
bio-publisci 0.1.0
A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...
34,280 下载
ulla 0.9.9.2
'ulla' is a program for calculating environment-specific substitution tables from user ...
33,294 下载
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
32,221 下载
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
32,221 下载
bio-faster 0.4.5
A fast parser for FastQ files
31,813 下载