Dépendances inversées pour bio Latest version of the following gems require bio
rbbt-sources 3.4.2
Data sources like PubMed, Entrez Gene, or Gene Ontology
251 099 Téléchargements
mspire 0.10.8.0
mass spectrometry proteomics, lipidomics, and tools, a rewrite of mspire, merging of ms...
239 258 Téléchargements
snp-search 2.12.0
Use the snp-search tool to create, import, manipulate and query your SNP database
135 602 Téléchargements
bio-samtools 2.6.2
Binder of samtools for ruby, on the top of FFI. This project was born from the need...
130 165 Téléchargements
bio-polyploid-tools 1.2.1
Repository of tools developed at Crop Genetics in JIC to work with polyploid wheat
127 039 Téléchargements
bacterial-annotator 1.0.1
GEM to annotate bacterial genome sequence based on a reference genome and complete the ...
112 239 Téléchargements
protk 1.4.4
Commandline tools for proteomics
104 240 Téléchargements
parse_fasta 2.5.2
Provides nice, programmatic access to fasta and fastq files, as well as providing Seque...
92 577 Téléchargements
bio-gadget 0.5.0
Gadgets for bioinformatics
87 799 Téléchargements
iroki 0.0.36
Command line app and library code for Iroki, a phylogenetic tree customization program.
85 467 Téléchargements
transrate 1.0.1
a library and command-line tool for quality assessment of de-novo transcriptome assemblies
83 891 Téléchargements
bio-ucsc-api 0.6.5
Ruby UCSC API: accessing the UCSC Genome Database using Ruby
80 207 Téléchargements
bio-svgenes 0.4.1
This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...
64 338 Téléchargements
ms-core 0.0.19
basic, shared functionality for mspire libraries.
59 489 Téléchargements
biointerchange 1.0.8
BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous ...
50 889 Téléchargements
crb-blast 0.6.9
See summary
50 731 Téléchargements
wrnap 1.2.2
A comprehensive wrapper w(RNA)pper for various RNA CLI programs.
49 012 Téléchargements
bio-gff3 0.9.1
GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...
47 944 Téléchargements
full_lengther_next 1.0.6
FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and i...
45 460 Téléchargements
bio-basespace-sdk 0.1.7
BaseSpace Ruby SDK is a Ruby based Software Development Kit to be used in the developme...
44 172 Téléchargements
genevalidatorapp 2.1.8
A Web App wrapper for GeneValidator, a program for validating gene predictions.
41 514 Téléchargements
bio-band 0.1.11
Data mining and machine learning algorithms for JRuby
41 492 Téléchargements
rbfam 12.0.1.1
Light wrapper for RFam data in Ruby.
41 125 Téléchargements
genevalidator 2.1.5
The tool validates the input predicted genes and provides useful information (length va...
40 376 Téléchargements
fasta_util 0.5.2
Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on th...
39 194 Téléchargements
bio-publisci 0.1.0
A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...
34 779 Téléchargements
ulla 0.9.9.2
'ulla' is a program for calculating environment-specific substitution tables from user ...
33 804 Téléchargements
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
32 631 Téléchargements
bio-faster 0.4.5
A fast parser for FastQ files
32 105 Téléchargements
sciruby-full 0.2.11
Scientific gems for Ruby. This is the full installation with rigid version constraints.
29 726 Téléchargements