Dependencias inversas para bio La última versión de las siguientes gemas requieren bio
sciruby-full 0.2.11
Scientific gems for Ruby. This is the full installation with rigid version constraints.
29.400 Descargas
bio-polymarker_db_batch 0.5.1
Server for polymarker. To be used with cron
29.172 Descargas
bio-velvet 0.6.0
Parser to work with some file formats used in the velvet DNA assembler
27.998 Descargas
egor 0.9.0
'egor' is a program for calculating environment-specific substitution tables from user ...
27.556 Descargas
bio-tm_hmm 0.2.4
A bioruby plugin for interaction with the transmembrane predictor TMHMM
27.500 Descargas
bio-bigbio 0.1.6
Fasta reader, ORF emitter, sequence translation
27.080 Descargas
bio-dbla-classifier 0.7.1
Methods to classify and manipulate PfEMP1 DBL-alpha sequence tags
26.839 Descargas
bio-signalp 0.3.1
A wrapper for the signal peptide prediction algorith SignalP. Not very well supported, ...
26.233 Descargas
bio-kmer_counter 0.1.2
A biogem for counting small kmers for fingerprinting nucleotide sequences. See README f...
25.492 Descargas
scaffolder 0.5.0
Turns scaffolded contigs and annotations into a genome.
25.344 Descargas
scaffolder-test-helpers 0.4.1
Useful Helper methods and classes for testing scaffolder.
25.022 Descargas
bio-phyta 0.9.4
Pipeline to remove contaminations from EST libraries
24.458 Descargas
npsearch 2.1.8
Search for Neuropeptides based solely on the common neuropeptide markers (e.g. signal p...
23.274 Descargas
transfuse 0.5.0
See summary
22.172 Descargas
finishm 0.0.9
De-novo assemblies generally only provide draft genomes. FinishM is aimed at improving ...
22.106 Descargas
bio-fasta_retrieve 0.0.7
Gem that helps to retrieve DNA sequence from UCSC
22.036 Descargas
bio-sambamba 0.0.5
New Sambamba library comes with a command-line tool for working with SAM/BAM files. Thi...
21.995 Descargas
acnfp-trans-counter 0.2.0
A quick and dirty tool for analysis of transition and transversion frequency aross and ...
21.166 Descargas
acnfp-trans-counter 0.2.0
A quick and dirty tool for analysis of transition and transversion frequency aross and ...
21.166 Descargas
semin-ulla 0.9.9.1
'ulla' is a program for calculating environment-specific substitution tables from user ...
21.017 Descargas
scaffolder-annotation-locator 0.2.0
Build a genome scaffold using scaffolder and a set of annotated contigs. This tool upda...
21.013 Descargas
bio-assembly 0.1.0
bioruby plugin to parse, write, and manipulate assembly data
20.333 Descargas
bio-assembly 0.1.0
bioruby plugin to parse, write, and manipulate assembly data
20.333 Descargas
bio-isoelectric_point 0.1.3
A bioruby plugin for calculating the isoelectric point of a protein
20.066 Descargas
bio-velvet_underground 0.3.1
Bindings to some internals of the velvet assembler.
19.941 Descargas
bio-nexml 1.1.0
This plugin reads, writes and generates NeXML
19.885 Descargas
orf_finder 0.1.8
ORF Finder is a library that with a sequence of nucletotides it finds the all the p...
18.729 Descargas
genfrag 0.0.0.4
This is a development release. Some features are functional at this time. Genfrag allo...
18.124 Descargas
cheripic 1.2.7
a library and commandline tool to pick causative mutation from bulks segregant sequencing
17.984 Descargas
dirseq 0.4.3
FPKG (gene expression metric) calculator for metatranscriptomics
17.885 Descargas