bio 的反向依赖 以下 Gem 的最新版本需要 bio
rbbt-sources 3.4.2
Data sources like PubMed, Entrez Gene, or Gene Ontology
247,034 下载
mspire 0.10.8.0
mass spectrometry proteomics, lipidomics, and tools, a rewrite of mspire, merging of ms...
235,620 下载
snp-search 2.12.0
Use the snp-search tool to create, import, manipulate and query your SNP database
134,137 下载
bio-samtools 2.6.2
Binder of samtools for ruby, on the top of FFI. This project was born from the need...
128,834 下载
bio-polyploid-tools 1.2.1
Repository of tools developed at Crop Genetics in JIC to work with polyploid wheat
125,266 下载
bacterial-annotator 1.0.1
GEM to annotate bacterial genome sequence based on a reference genome and complete the ...
110,823 下载
protk 1.4.4
Commandline tools for proteomics
102,811 下载
parse_fasta 2.5.2
Provides nice, programmatic access to fasta and fastq files, as well as providing Seque...
91,164 下载
bio-gadget 0.5.0
Gadgets for bioinformatics
86,952 下载
iroki 0.0.36
Command line app and library code for Iroki, a phylogenetic tree customization program.
84,393 下载
transrate 1.0.1
a library and command-line tool for quality assessment of de-novo transcriptome assemblies
82,602 下载
bio-ucsc-api 0.6.5
Ruby UCSC API: accessing the UCSC Genome Database using Ruby
79,418 下载
bio-svgenes 0.4.1
This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...
63,693 下载
ms-core 0.0.19
basic, shared functionality for mspire libraries.
58,774 下载
biointerchange 1.0.8
BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous ...
50,234 下载
crb-blast 0.6.9
See summary
50,116 下载
wrnap 1.2.2
A comprehensive wrapper w(RNA)pper for various RNA CLI programs.
48,463 下载
bio-gff3 0.9.1
GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...
47,456 下载
full_lengther_next 1.0.6
FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and i...
44,845 下载
bio-basespace-sdk 0.1.7
BaseSpace Ruby SDK is a Ruby based Software Development Kit to be used in the developme...
43,705 下载
bio-band 0.1.11
Data mining and machine learning algorithms for JRuby
40,934 下载
genevalidatorapp 2.1.8
A Web App wrapper for GeneValidator, a program for validating gene predictions.
40,744 下载
rbfam 12.0.1.1
Light wrapper for RFam data in Ruby.
40,326 下载
genevalidator 2.1.5
The tool validates the input predicted genes and provides useful information (length va...
39,824 下载
fasta_util 0.5.2
Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on th...
38,919 下载
bio-publisci 0.1.0
A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...
34,293 下载
ulla 0.9.9.2
'ulla' is a program for calculating environment-specific substitution tables from user ...
33,303 下载
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
32,228 下载
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
32,228 下载
bio-faster 0.4.5
A fast parser for FastQ files
31,814 下载