bio 的反向依赖 以下 Gem 的最新版本需要 bio
rbbt-sources 3.4.2
Data sources like PubMed, Entrez Gene, or Gene Ontology
249,245 下载
mspire 0.10.8.0
mass spectrometry proteomics, lipidomics, and tools, a rewrite of mspire, merging of ms...
238,198 下载
snp-search 2.12.0
Use the snp-search tool to create, import, manipulate and query your SNP database
134,789 下载
bio-samtools 2.6.2
Binder of samtools for ruby, on the top of FFI. This project was born from the need...
129,654 下载
bio-polyploid-tools 1.2.1
Repository of tools developed at Crop Genetics in JIC to work with polyploid wheat
126,318 下载
bacterial-annotator 1.0.1
GEM to annotate bacterial genome sequence based on a reference genome and complete the ...
111,685 下载
protk 1.4.4
Commandline tools for proteomics
103,741 下载
parse_fasta 2.5.2
Provides nice, programmatic access to fasta and fastq files, as well as providing Seque...
91,968 下载
bio-gadget 0.5.0
Gadgets for bioinformatics
87,512 下载
iroki 0.0.36
Command line app and library code for Iroki, a phylogenetic tree customization program.
85,029 下载
transrate 1.0.1
a library and command-line tool for quality assessment of de-novo transcriptome assemblies
83,447 下载
bio-ucsc-api 0.6.5
Ruby UCSC API: accessing the UCSC Genome Database using Ruby
79,934 下载
bio-svgenes 0.4.1
This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...
64,100 下载
ms-core 0.0.19
basic, shared functionality for mspire libraries.
59,216 下载
biointerchange 1.0.8
BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous ...
50,669 下载
crb-blast 0.6.9
See summary
50,488 下载
wrnap 1.2.2
A comprehensive wrapper w(RNA)pper for various RNA CLI programs.
48,823 下载
bio-gff3 0.9.1
GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...
47,797 下载
full_lengther_next 1.0.6
FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and i...
45,250 下载
bio-basespace-sdk 0.1.7
BaseSpace Ruby SDK is a Ruby based Software Development Kit to be used in the developme...
44,030 下载
bio-band 0.1.11
Data mining and machine learning algorithms for JRuby
41,314 下载
genevalidatorapp 2.1.8
A Web App wrapper for GeneValidator, a program for validating gene predictions.
41,196 下载
rbfam 12.0.1.1
Light wrapper for RFam data in Ruby.
40,849 下载
genevalidator 2.1.5
The tool validates the input predicted genes and provides useful information (length va...
40,145 下载
fasta_util 0.5.2
Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on th...
39,084 下载
bio-publisci 0.1.0
A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...
34,624 下载
ulla 0.9.9.2
'ulla' is a program for calculating environment-specific substitution tables from user ...
33,677 下载
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
32,498 下载
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
32,498 下载
bio-faster 0.4.5
A fast parser for FastQ files
32,001 下载