bio 的反向依赖 以下 Gem 的最新版本需要 bio
rbbt-sources 3.4.2
Data sources like PubMed, Entrez Gene, or Gene Ontology
243,678 下载
mspire 0.10.8.0
mass spectrometry proteomics, lipidomics, and tools, a rewrite of mspire, merging of ms...
231,730 下载
snp-search 2.12.0
Use the snp-search tool to create, import, manipulate and query your SNP database
133,193 下载
bio-samtools 2.6.2
Binder of samtools for ruby, on the top of FFI. This project was born from the need...
127,385 下载
bio-polyploid-tools 1.2.1
Repository of tools developed at Crop Genetics in JIC to work with polyploid wheat
123,410 下载
bacterial-annotator 1.0.1
GEM to annotate bacterial genome sequence based on a reference genome and complete the ...
109,549 下载
protk 1.4.4
Commandline tools for proteomics
101,559 下载
parse_fasta 2.5.2
Provides nice, programmatic access to fasta and fastq files, as well as providing Seque...
90,040 下载
bio-gadget 0.5.0
Gadgets for bioinformatics
85,955 下载
iroki 0.0.36
Command line app and library code for Iroki, a phylogenetic tree customization program.
83,186 下载
transrate 1.0.1
a library and command-line tool for quality assessment of de-novo transcriptome assemblies
81,188 下载
bio-ucsc-api 0.6.5
Ruby UCSC API: accessing the UCSC Genome Database using Ruby
78,467 下载
bio-svgenes 0.4.1
This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...
62,942 下载
ms-core 0.0.19
basic, shared functionality for mspire libraries.
57,994 下载
biointerchange 1.0.8
BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous ...
49,679 下载
crb-blast 0.6.9
See summary
49,392 下载
wrnap 1.2.2
A comprehensive wrapper w(RNA)pper for various RNA CLI programs.
47,797 下载
bio-gff3 0.9.1
GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...
46,859 下载
full_lengther_next 1.0.6
FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and i...
44,067 下载
bio-basespace-sdk 0.1.7
BaseSpace Ruby SDK is a Ruby based Software Development Kit to be used in the developme...
43,262 下载
bio-band 0.1.11
Data mining and machine learning algorithms for JRuby
40,285 下载
genevalidatorapp 2.1.8
A Web App wrapper for GeneValidator, a program for validating gene predictions.
40,074 下载
rbfam 12.0.1.1
Light wrapper for RFam data in Ruby.
39,583 下载
genevalidator 2.1.5
The tool validates the input predicted genes and provides useful information (length va...
39,226 下载
fasta_util 0.5.2
Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on th...
38,600 下载
bio-publisci 0.1.0
A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...
33,705 下载
ulla 0.9.9.2
'ulla' is a program for calculating environment-specific substitution tables from user ...
32,779 下载
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
31,676 下载
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
31,676 下载
bio-faster 0.4.5
A fast parser for FastQ files
31,435 下载