Reverse dependencies for bio Latest version of the following gems require bio
bio-protparam 0.2.0
Bio::Protparam has same interface and function as Bio::Tools::Protparam class of BioPer...
10,819 Downloads
bio-kb-illumina 0.1.0
Provide access to the IlluminaHumanAnnotations. Database comes form Bioconductor's pack...
10,646 Downloads
bio-core 0.0.1
Bioruby core plugins
10,186 Downloads
bio-core 0.0.1
Bioruby core plugins
10,186 Downloads
bio-wolf_psort_wrapper 0.0.3
Enables the localisation predictor WoLF PSORT to be run locally. The algorithm is avail...
9,927 Downloads
bio-cnls_screenscraper 0.3.0
Programmatic interface to the cNLS nuclear localisation signal prediction software
9,846 Downloads
bio-mummer 0.2.1
Help for working with the output of the .delta files produced by nucmer and promer
9,680 Downloads
bio-hmmer_model 0.0.2
Parse PFAM HMM definition files so that the models can be accessible programmatically
9,437 Downloads
bio-gag 0.1.0
bio-gag is a biogem for detecting and correcting a particular type of error that occurs...
9,381 Downloads
qu-utils 1.0.3
Useful class or methods used in qu-* projects.
9,048 Downloads
ezgff 0.0.6
Utilities for GFF3, the genome annotation format. Useful to explore the gene model feat...
8,943 Downloads
sylfy 0.1.0
Systems Biology Library for Ruby
8,801 Downloads
ensemblrest 1.1.1
Ensembl REST Ruby API
8,761 Downloads
bio-hmmer3_report 0.1.0
Enables programmatic parsing of HMMER version 3 reports
8,618 Downloads
mizlab 0.1.7
The tools for our laboratory
8,592 Downloads
bio-old-biofetch-emulator 1.0.0
Emulator that emulates Bio::Fetch object in BioRuby as if old BioRuby BioFetch server w...
8,541 Downloads
bio-gggenome 0.2.0
A Ruby client for GGGenome the Ultrafast sequence search
8,363 Downloads
bio-statsample-glm 0.1.1
Statsample-GLM is an extension to Statsample, an advance statistics suite in Ruby. This...
8,306 Downloads
bio-ensembl-rest 0.2.0
A Ruby library for the RESTful Ensembl API.
8,301 Downloads
bio-shell 1.0.1
BioRuby Shell is a command line interface on BioRuby open source bioinformatics library...
8,290 Downloads
bio-ipcress 0.1.0
a programmatic interface to the iPCRess in-silico PCR software. iPCRess is part of the ...
8,086 Downloads
bio-express_beta_diversity 0.1.0
Interface for express beta diversity file formats
7,957 Downloads
bio-cigar 0.1.0
A parser for CIGAR format alignments.
7,920 Downloads
neurohmmer 0.1.2
Identify Neuropeptides using powerful Hidden Markov Models. For further information p...
7,744 Downloads
bio-samtools-server 0.1.2
A minimal web service on the top of sinatra to query bam files
7,710 Downloads
bio-nwk 0.1.4
Some codes for parsing newick tree
7,592 Downloads
ruby-band 0.1.13
Data mining and machine learning algorithms for JRuby
7,348 Downloads
bio-gfastqc 0.0.4
Bioinformatics. Aggregate FastQC (quality control for Next Generation Sequencing -NGS-)...
6,875 Downloads
bio-pangenome 0.1.3
Tools to find similarity between pangenomes.
6,623 Downloads
bio-executables 1.0.0
BioRuby executables is a collection of miscellaneous utilities for bioinformatics that ...
6,378 Downloads