Dépendances inversées pour bio Latest version of the following gems require bio
rbbt-sources 3.4.2
Data sources like PubMed, Entrez Gene, or Gene Ontology
244 055 Téléchargements
mspire 0.10.8.0
mass spectrometry proteomics, lipidomics, and tools, a rewrite of mspire, merging of ms...
232 687 Téléchargements
snp-search 2.12.0
Use the snp-search tool to create, import, manipulate and query your SNP database
133 307 Téléchargements
bio-samtools 2.6.2
Binder of samtools for ruby, on the top of FFI. This project was born from the need...
127 698 Téléchargements
bio-polyploid-tools 1.2.1
Repository of tools developed at Crop Genetics in JIC to work with polyploid wheat
123 738 Téléchargements
bacterial-annotator 1.0.1
GEM to annotate bacterial genome sequence based on a reference genome and complete the ...
109 745 Téléchargements
protk 1.4.4
Commandline tools for proteomics
101 760 Téléchargements
parse_fasta 2.5.2
Provides nice, programmatic access to fasta and fastq files, as well as providing Seque...
90 157 Téléchargements
bio-gadget 0.5.0
Gadgets for bioinformatics
86 151 Téléchargements
iroki 0.0.36
Command line app and library code for Iroki, a phylogenetic tree customization program.
83 460 Téléchargements
transrate 1.0.1
a library and command-line tool for quality assessment of de-novo transcriptome assemblies
81 510 Téléchargements
bio-ucsc-api 0.6.5
Ruby UCSC API: accessing the UCSC Genome Database using Ruby
78 718 Téléchargements
bio-svgenes 0.4.1
This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...
63 125 Téléchargements
ms-core 0.0.19
basic, shared functionality for mspire libraries.
58 141 Téléchargements
biointerchange 1.0.8
BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous ...
49 787 Téléchargements
crb-blast 0.6.9
See summary
49 576 Téléchargements
wrnap 1.2.2
A comprehensive wrapper w(RNA)pper for various RNA CLI programs.
47 938 Téléchargements
bio-gff3 0.9.1
GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...
47 000 Téléchargements
full_lengther_next 1.0.6
FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and i...
44 210 Téléchargements
bio-basespace-sdk 0.1.7
BaseSpace Ruby SDK is a Ruby based Software Development Kit to be used in the developme...
43 387 Téléchargements
bio-band 0.1.11
Data mining and machine learning algorithms for JRuby
40 444 Téléchargements
genevalidatorapp 2.1.8
A Web App wrapper for GeneValidator, a program for validating gene predictions.
40 151 Téléchargements
rbfam 12.0.1.1
Light wrapper for RFam data in Ruby.
39 765 Téléchargements
genevalidator 2.1.5
The tool validates the input predicted genes and provides useful information (length va...
39 336 Téléchargements
fasta_util 0.5.2
Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on th...
38 631 Téléchargements
bio-publisci 0.1.0
A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...
33 850 Téléchargements
ulla 0.9.9.2
'ulla' is a program for calculating environment-specific substitution tables from user ...
32 908 Téléchargements
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
31 804 Téléchargements
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
31 804 Téléchargements
bio-faster 0.4.5
A fast parser for FastQ files
31 510 Téléchargements